论文标题
使用卷积神经网络对扩散加权MRI中前列腺癌检测的数据增强策略的全面研究
A Comprehensive Study of Data Augmentation Strategies for Prostate Cancer Detection in Diffusion-weighted MRI using Convolutional Neural Networks
论文作者
论文摘要
数据增强是指一组技术,其目标是与有限的可用数据作斗争,以改善模型概括并将样本分布推向真实分布。尽管已经在深度学习的背景下研究了各种计算机视觉任务的不同的增强策略及其组合,但是在医学成像领域的特定工作很少,据我们所知,没有专门的工作在探索各种增强方法对前列腺癌检测中深度学习模型表现的影响。在这项工作中,我们静态地应用了五种最常用的增强技术(随机旋转,水平翻转,垂直翻转,随机作物和翻译),以分别分别分别分别分别进行217名患者的前列腺扩散磁共振成像训练数据集,并评估每种方法对前列腺癌检测准确性的效果。将增强算法独立地应用于每个数据通道,并分别对五个增强组进行训练,并进行了浅卷积神经网络(CNN)。我们使用102名患者的验证集对接收器操作特征(ROC)曲线(ROC)曲线(AUC)进行了评估训练有素的CNN的性能。浅网络以旋转方法获得的最佳基于2D切片的AUC优于深层网络。
Data augmentation refers to a group of techniques whose goal is to battle limited amount of available data to improve model generalization and push sample distribution toward the true distribution. While different augmentation strategies and their combinations have been investigated for various computer vision tasks in the context of deep learning, a specific work in the domain of medical imaging is rare and to the best of our knowledge, there has been no dedicated work on exploring the effects of various augmentation methods on the performance of deep learning models in prostate cancer detection. In this work, we have statically applied five most frequently used augmentation techniques (random rotation, horizontal flip, vertical flip, random crop, and translation) to prostate Diffusion-weighted Magnetic Resonance Imaging training dataset of 217 patients separately and evaluated the effect of each method on the accuracy of prostate cancer detection. The augmentation algorithms were applied independently to each data channel and a shallow as well as a deep Convolutional Neural Network (CNN) were trained on the five augmented sets separately. We used Area Under Receiver Operating Characteristic (ROC) curve (AUC) to evaluate the performance of the trained CNNs on a separate test set of 95 patients, using a validation set of 102 patients for finetuning. The shallow network outperformed the deep network with the best 2D slice-based AUC of 0.85 obtained by the rotation method.