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Immersogeometric analysis (IMGA) is a geometrically flexible method that enables one to perform multiphysics analysis directly using complex computer-aided design (CAD) models. In this paper, we develop a novel IMGA approach for simulating incompressible and compressible flows around complex geometries represented by point clouds. The point cloud object's geometry is represented using a set of unstructured points in the Euclidean space with (possible) orientation information in the form of surface normals. Due to the absence of topological information in the point cloud model, there are no guarantees for the geometric representation to be watertight or 2-manifold or to have consistent normals. To perform IMGA directly using point cloud geometries, we first develop a method for estimating the inside-outside information and the surface normals directly from the point cloud. We also propose a method to compute the Jacobian determinant for the surface integration (over the point cloud) necessary for the weak enforcement of Dirichlet boundary conditions. We validate these geometric estimation methods by comparing the geometric quantities computed from the point cloud with those obtained from analytical geometry and tessellated CAD models. In this work, we also develop thermal IMGA to simulate heat transfer in the presence of flow over complex geometries. The proposed framework is tested for a wide range of Reynolds and Mach numbers on benchmark problems of geometries represented by point clouds, showing the robustness and accuracy of the method. Finally, we demonstrate the applicability of our approach by performing IMGA on large industrial-scale construction machinery represented using a point cloud of more than 12 million points.